Package: naturdata 0.4.16

Lars Dalby

naturdata: Tools For Working With Naturdata_kalo

This R package provides tools for working with the naturdata_kalo database

Authors:Lars Dalby [aut, cre]

naturdata_0.4.16.tar.gz
naturdata_0.4.16.zip(r-4.7)naturdata_0.4.16.zip(r-4.6)naturdata_0.4.16.zip(r-4.5)
naturdata_0.4.16.tgz(r-4.6-any)naturdata_0.4.16.tgz(r-4.5-any)
naturdata_0.4.16.tar.gz(r-4.7-any)naturdata_0.4.16.tar.gz(r-4.6-any)
naturdata_0.4.16.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
naturdata/json (API)
NEWS

# Install 'naturdata' in R:
install.packages('naturdata', repos = c('https://ldalby.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://gitlab.au.dk/ecos/tools/r-pkgs/naturdata

Datasets:

On CRAN:

Conda:

1.70 score 45 exports 35 dependencies

Last updated from:7eb6030d7e. Checks:7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE142
source / vignettesOK187
linux-release-x86_64NOTE129
macos-release-arm64NOTE117
macos-oldrel-arm64NOTE134
windows-develNOTE74
windows-releaseNOTE71
windows-oldrelNOTE70
wasm-releaseOK120

Exports:ndb_aggregate_pinpointndb_append_coordsndb_calc_avgndb_calc_cover_rationdb_calc_jord_cnndb_calc_n_arterndb_calc_n_store_stammerndb_calc_weighted_assessmentndb_clean_artslistendb_clean_kemindb_clean_lysaaben_strukturndb_clean_plantekemindb_clean_skov_doedtvedndb_clean_skov_strukturndb_clean_stamdatandb_connectndb_create_tblndb_disconnectndb_filter_artslistendb_filter_lysaaben_progndb_filter_skov_progndb_getndb_get_artsliste_pfndb_get_artsnavnendb_get_artsscorerndb_get_arttraitsndb_get_doedtvedndb_get_ellenbergndb_get_laverndb_get_lysaaben_strukturndb_get_mosserndb_get_novana_aktidsndb_get_plantekemindb_get_schemandb_get_skov_strukturndb_get_skov_trae_diam_naturtypendb_get_skov_traeregistreringndb_get_stamdatandb_get_tblndb_labelndb_renamendb_to_percentndb_update_import_jobndb_write_artslistendb_write_to_db

Dependencies:bitbit64blobcachemclicpp11DBIdbplyrdplyrfastmapgenericsgluehmslifecyclelubridatemagrittrmemoiseodbcpillarpkgconfigpurrrR6RcpprlangRSQLitestringistringrtibbletidyrtidyselecttimechangeutf8vctrswithrwk

Readme and manuals

Help Manual

Help pageTopics
Generate a condition stringget_condition
Calculate number of pins hit by an aggregated species groupndb_aggregate_pinpoint
Extract x and y from WKTndb_append_coords
Calculate the average across multiple columnsndb_calc_avg
Calculate the cover rationdb_calc_cover_ratio
Calculate jord_CNndb_calc_jord_cn
Calculate the number of unique species observationsndb_calc_n_arter
Calculate the number of large trunksndb_calc_n_store_stammer
Calculate an area weighted assessmentndb_calc_weighted_assessment
Function to clean the artsliste tablendb_clean_artsliste
Function to clean the raw.kemi tablendb_clean_kemi
Function to clean the raw.lysaaben_struktur tablendb_clean_lysaaben_struktur
Function to clean the plantekemi tablendb_clean_plantekemi
Function to clean the skov_doedtved tablendb_clean_skov_doedtved
Function to clean the skov_struktur tablendb_clean_skov_struktur
Function to clean the raw.stamdata tablendb_clean_stamdata
Connect to naturdata_kalondb_connect
Create and write tablendb_create_tbl
Disconnect from databasendb_disconnect
Filter the artsliste tablendb_filter_artsliste
Filter to only program IDs for lysåbenndb_filter_lysaaben_prog
Filter to only skov programsndb_filter_skov_prog
Get a specified table from the databasendb_get
Get the artsgruppe_planter tablendb_get_artsgruppe
Get the artsliste tablendb_get_artsliste_pf
Get the list of species namesndb_get_artsnavne
Get the list of artsscorer per speciesndb_get_artsscorer
Get the list of traitsndb_get_arttraits
Get the skov doedtved tablendb_get_doedtved
Get the Ellenberg valuesndb_get_ellenberg
Get the list of lichen species namesndb_get_laver
Get the lysaaben struktur tablendb_get_lysaaben_struktur
Get the artsnavne table only of bryophytesndb_get_mosser
Get the list of aktId's from NOVANAndb_get_novana_aktids
Get the plantekemi tablendb_get_plantekemi
Get the database schemandb_get_schema
Get the skov struktur tablendb_get_skov_struktur
Get the trae diameter per naturtype tablendb_get_skov_trae_diam_naturtype
Get the skov traeregistrering tablendb_get_skov_traeregistrering
Get the stamdata tablendb_get_stamdata
Get table from the database and filterndb_get_tbl
Given the variable name, return the labelndb_label
Naturdata_kalo labelsndb_labels
Naturdata_kalo namesndb_names
Rename either a data.frame or vectorndb_rename
Convert from m^{2} cover to percentndb_to_percent
Update the import.jobs tablendb_update_import_job
Write artsliste to databasendb_write_artsliste
Write table to databasendb_write_to_db
No-go naturtypernogo_naturtyper
Replace NA values based on a set of conditionsreplace_na_if